PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN42314.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 353aa    MW: 38710.9 Da    PI: 4.597
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN42314.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-102773171055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 rrRR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  KHN42314.1 277 RRRRERINERLRILQHLVPNG-----TKVDISTMLEEAVKYVKFLQ 317
                 9******************97.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.14E-14266332IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.32267316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-12272326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.6E-11273322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.7E-8277317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MDPVEQISEE WSSLSGFYTA EEADFMSQLL GNCSLPENLC GNFNLGIPSA IWPGHESTIV  60
SVTGINESPY FHANADNSNT NYLCFSQGSS FTADSSNIFP TTSGNKCDPV ANIGYMSVGF  120
PLGDAKFSPY NVQGSDSQQI NENTDEELGL EVIADKKLQD HQECEVLVSE AAQEDINTNL  180
EKSGKRSRGS MQVRKSKKNV KSMKKPKSDS ISNSEEGRSP DLQGFCSEDD DSNASQELNG  240
GGSSSLSLED STSLKLKGKK STANRGSATD PQSVYARRRR ERINERLRIL QHLVPNGTKV  300
DISTMLEEAV KYVKFLQLQI KLLSSDDLWM YAPIAYNGMN IGLDLNITPT KQP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351770.0AC235177.1 Glycine max strain Williams 82 clone GM_WBb0007H11, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003555293.10.0PREDICTED: transcription factor bHLH84-like
TrEMBLA0A0B2SDF00.0A0A0B2SDF0_GLYSO; Transcription factor bHLH84
TrEMBLK7N3960.0K7N396_SOYBN; Uncharacterized protein
STRINGGLYMA20G26991.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-42bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]